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For clinicians

Clinical reference: UPF3B-related disorder.

A rare X-linked recessive condition, formerly Lujan-Fryns syndrome, that can present with intellectual disability, autism-spectrum features, and mild dysmorphism, and is likely underdiagnosed. Below is a quick reference for suspicion, testing, and referral.

Consider UPF3B when a male patient has:
  • Intellectual disability, often mild to moderate
  • Marfanoid habitus
  • Hypernasal speech and hypotonia
  • Autism-spectrum features not fully explaining the picture
  • Maternal male relatives with similar features
Testing pathway:
  • Chromosomal microarray, first tier
  • Exome or genome sequencing if microarray is negative
  • Texas Medicaid covers exome sequencing for children with unexplained intellectual disability or developmental delay
Reported neuroimaging findings:
  • Corpus callosum dysgenesis
  • Anterior commissure hypoplasia or agenesis
  • Olfactory bulb agenesis
  • Incomplete hippocampal rotation
  • Mild cerebellar atrophy, in a single patient

Neuroimaging findings compiled from Tarpey et al. 2007, Laumonnier et al. 2010, Cherot et al. 2018, and Romano et al. 2024. Brain MRI is available for only a small number of published patients, so these features are not established as typical or expected.

Refer locally.

UT Health San Antonio, Division of Pediatric Genetics

Local referral pathway for genetics evaluation and testing. Phone and fax to be confirmed directly with the clinic before publication.

Referral info
One-page clinical flyer (PDF)

A printable, shareable reference for your practice, with a family-facing resource on the back.

In progress
Simons Searchlight UPF3B gene guide

Free clinical and family-facing reference, available in multiple languages.

View guide

Last updated September 2026.